Basic Information
Locus ID:
nbis-gene-5862
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
FLS2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00004.1 | 4455067 | 4463374 | - | nbis-gene-5862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 54,418.96 Da | 43.32 | 88.49 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 249 | 271 | 6.8E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 451 | 5.12E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 338 | 457 | 8.9E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 110 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46330.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. | 0 |
| RefSeq | XP_012703334.2 | LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase FLS2 [Setaria italica] | 0 |
| Q0JA29 | LRR receptor-like serine/threonine-protein kinase FLS2 OS=Oryza sativa subsp. japonica OX=39947 GN=FLS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811QPE8 | LRRNT_2 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS43040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg25002 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah016593 |
| Apiaceae | Apium graveolens | 2 | Ag6G01107, Ag7G00868 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G018220 |
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_01.1982.V1.1, AsparagusV1_02.1875.V1.1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5862 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24943 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17193 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000022l.52 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012202 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9094 |