Basic Information
Locus ID:
nbis-gene-5824
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00004.1 | 4304190 | 4309298 | + | nbis-gene-5824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 87,813.52 Da | 46.52 | 87.86 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 213 | 354 | 7.8E-31 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 355 | 400 | 4.3E-12 | - |
| Pfam | PF00069 | Protein kinase domain | 674 | 811 | 2.2E-26 | IPR000719 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 433 | 470 | 1.6E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 642 | 811 | 3.11E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 638 | 674 | 5.4E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 812 | 1.3E-42 | - |
| SMART | SM00220 | serkin_6 | 651 | 806 | 2.3E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 468 | 812 | 21.417969 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 687 | 699 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 70 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_039773894.1 | serine/threonine-protein kinase CTR1-like [Panicum virgatum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TWS3 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39344 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology