Basic Information
Locus ID:
nbis-gene-57804
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc05677.1 | 1 | 825 | + | nbis-gene-57804 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 14,648.70 Da | 43.16 | 68.67 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 53 | 135 | 2.1E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 49 | 135 | 1.54E-18 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 49 | 135 | 2.0E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 135 | 14.972866 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 85 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_025802433.1 | CDPK-related kinase 5-like [Panicum hallii] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7EYQ2 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G435800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011937m.g.v1.0, Thhalv10023098m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0190_0010.v2.2 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G04062 |
| Poaceae | Zea mays | 2 | Zm00001eb085930_P001, Zm00001eb233750_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-32968, nbis-gene-57804 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027768, gene-LOC114075599 |