Basic Information
Locus ID:
nbis-gene-57317
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc04387.1 | 827 | 1385 | + | nbis-gene-57317 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 18,645.02 Da | 33.50 | 134.62 | 1.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 13 | 180 | 7.2E-28 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 6 | 181 | 3.92E-33 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 1 | 182 | 2.8E-41 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 182 | 25.052879 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 63 | 79 | - | IPR005829 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 103 | 124 | 8.9E-80 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 133 | 155 | 8.9E-80 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 45 | 64 | 8.9E-80 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 161 | 181 | 8.9E-80 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 16 | 32 | 8.9E-80 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 76 | 100 | 8.9E-80 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_023889269.1 | major facilitator superfamily domain-containing protein 10-like [Quercus suber] | 0 |
| P02981 | Tetracycline resistance protein, class C OS=Escherichia coli OX=562 GN=tetA PE=1 SV=1 | 0 | |
| TrEMBL | C9ATL8 | Tetracycline resistance protein (Fragment) OS=Enterococcus faecium Com15 OX=565663 GN=EFWG_02720 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology