Basic Information
Locus ID:
nbis-gene-57221
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
protein domain specific binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc04154.1 | 71 | 999 | + | nbis-gene-57221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 7,621.47 Da | 62.25 | 73.94 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 1 | 35 | 5.2E-14 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 1 | 40 | 8.63E-15 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 46 | 3.6E-19 | IPR036815 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 17 | 36 | - | IPR023409 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 66 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G09000.1 | general regulatory factor 1. Encodes a 14-3-3 gene, designated GRF1 chi (for general regulatory factor1-G-box factor 14-3-3 homolog isoform chi). The major native forms of 14-3-3s are homo- and hetero-dimers, the biological functions of which are to interact physically with specific client proteins and thereby effect a change in the client. As a result, 14-3-3s are involved in a vast array of processes such as the response to stress, cell-cycle control, and apoptosis, serving as adapters, activators, and repressors. There are currently 133 full-length sequences available. | 0 |
| RefSeq | XP_047072140.1 | 14-3-3-like protein GF14-C [Lolium rigidum] | 0 |
| Q6ZKC0 | 14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica OX=39947 GN=GF14C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z1Q9 | 14_3_3 domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_008704 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology