Basic Information
Locus ID:
nbis-gene-56591
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc02717.1 | 81 | 1749 | - | nbis-gene-56591 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.74 | 22,809.94 Da | 37.27 | 88.83 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03489 | Saposin-like type B, region 2 | 23 | 56 | 2.1E-13 | IPR008138 |
| Pfam | PF00026 | Eukaryotic aspartyl protease | 4 | 212 | 3.4E-28 | IPR033121 |
| Pfam | PF05184 | Saposin-like type B, region 1 | 86 | 123 | 2.6E-13 | IPR007856 |
| SUPERFAMILY | SSF50630 | Acid proteases | 109 | 212 | 2.38E-26 | IPR021109 |
| SUPERFAMILY | SSF47862 | Saposin | 21 | 123 | 2.07E-30 | IPR011001 |
| Gene3D | G3DSA:1.10.225.10 | - | 15 | 123 | 7.3E-31 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 127 | 213 | 1.5E-32 | IPR021109 |
| ProSiteProfiles | PS50015 | Saposin B type domain profile. | 84 | 125 | 12.6064 | IPR008139 |
| ProSiteProfiles | PS50015 | Saposin B type domain profile. | 20 | 60 | 13.292799 | IPR008139 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 1 | 211 | 18.570269 | IPR033121 |
| PRINTS | PR01797 | Saposin signature | 32 | 50 | 6.9E-7 | IPR008373 |
| PRINTS | PR01797 | Saposin signature | 85 | 107 | 6.9E-7 | IPR008373 |
Gene Ontology
Biological Process:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11910.1 | aspartic proteinase A1. Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). | 0 |
| RefSeq | XP_008653243.2 | aspartic proteinase oryzasin-1 [Zea mays] | 0 |
| Q42456 | Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0567100 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9U9K7 | Aspartic proteinase oryzasin-1 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_36486 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg38318 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25822 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000010767 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G004750 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3149.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5128 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049989 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G098300 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G269300.1 |
| Poaceae | Zea mays | 19 | Zm00001eb046200_P001, Zm00001eb056740_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-56591 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g09600 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-22268 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9719 |
| Zosteraceae | Zostera marina | 1 | Zosma04g06120.v3.1 |