Basic Information
Locus ID:
nbis-gene-56584
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc02710.1 | 386 | 1366 | + | nbis-gene-56584 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 7,171.23 Da | 23.70 | 89.84 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 42 | 2.38E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 40 | 5.1E-10 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_016677880.1 | probable serine/threonine-protein kinase At1g01540 isoform X3 [Gossypium hirsutum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P5Y619 | Protein kinase domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA09615 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB02g004720.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g23980 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-3918, nbisL1-mrna-9040 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr12G004560 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-56584 |