HalophFGD

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Basic Information
Locus ID: nbis-gene-56350
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description: Wall-associated receptor kinase C-terminal
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc02254.1 1087 1878 - nbis-gene-56350
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.89 29,158.89 Da 48.76 61.56 -0.43
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 2 79 3.7E-14 IPR025287
Pfam PF14380 Wall-associated receptor kinase C-terminal 135 237 1.1E-18 IPR032872
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052142980.1 LOW QUALITY PROTEIN: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.7 [Oryza glaberrima] 0
TrEMBL A0A5J9SK51 Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_55248 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Anacardiaceae Pistacia vera 1 pistato.v30233140
Apiaceae Apium graveolens 2 Ag3G00953, Ag3G00960
Arecaceae Cocos nucifera 2 COCNU_06G009210, scaffold003228G000020
Arecaceae Phoenix dactylifera 2 gene-LOC113463076, gene-LOC120110545
Asteraceae Flaveria trinervia 1 Ftri16G08023
Hydrocharitaceae Thalassia testudinum 1 gene.Thate03g00980
Poaceae Echinochloa crus-galli 15 AH02.1557, AH02.2812, AH02.2813, AH02.2814, AH02.2818 ...
AH02.758, BH02.2900, BH02.2901, BH02.2902, BH02.2904, BH02.2905, BH02.753, CH02.3636, CH02.851, CH05.3597
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_1AG0029180, gene-QOZ80_1AG0029190 ...
gene-QOZ80_1AG0029210, gene-QOZ80_1AG0029240, gene-QOZ80_1BG0057520, gene-QOZ80_1BG0079400, gene-QOZ80_5AG0364270
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.3HG0225430.1.CDS1 ...
HORVU.MOREX.r3.3HG0281260.1.CDS1, HORVU.MOREX.r3.3HG0281270.1.CDS1, HORVU.MOREX.r3.3HG0281280.1, HORVU.MOREX.r3.3HG0281310.1, HORVU.MOREX.r3.3HG0281320.1.CDS1, HORVU.MOREX.r3.3HG0281330.1
Poaceae Lolium multiflorum 5 gene-QYE76_003721, gene-QYE76_054651, gene-QYE76_054652 ...
gene-QYE76_054664, gene-QYE76_054667
Poaceae Oryza coarctata 4 Oco01G017760, Oco01G017770, Oco01G017790, Oco10G015840
Poaceae Oryza sativa 3 LOC_Os01g04440.1, LOC_Os01g49560.1, LOC_Os01g49600.1
Poaceae Paspalum vaginatum 10 gene-BS78_03G072700, gene-BS78_03G233200 ...
gene-BS78_03G233300, gene-BS78_03G233400, gene-BS78_03G237100, gene-BS78_03G237400, gene-BS78_03G237600, gene-BS78_03G237700, gene-BS78_03G238200, gene-BS78_09G226100
Poaceae Puccinellia tenuiflora 1 Pt_Chr0602421
Poaceae Sporobolus alterniflorus 6 Chr02G012220, Chr02G023950, Chr03G003840, Chr03G013910 ...
Chr05G001930, Chr22G002110
Poaceae Thinopyrum elongatum 2 Tel3E01G086500, Tel3E01G436000
Poaceae Triticum dicoccoides 5 gene_TRIDC2AG071890, gene_TRIDC2AG071920 ...
gene_TRIDC2AG071940, gene_TRIDC3AG039100, gene_TRIDC3BG044280
Poaceae Triticum aestivum 7 TraesCS2B02G539800.1, TraesCS2D02G512845.1 ...
TraesCS2D02G512900.1, TraesCS2D02G513200.1.cds1, TraesCS3A02G262000.1, TraesCS3B02G295300.1, TraesCS3D02G262000.1
Poaceae Zoysia japonica 7 nbis-gene-12975, nbis-gene-24946, nbis-gene-26165 ...
nbis-gene-26166, nbis-gene-26167, nbis-gene-56350, nbis-gene-56701
Poaceae Zoysia macrostachya 3 Zma_g10920, Zma_g10921, Zma_g7575
Posidoniaceae Posidonia oceanica 1 gene.Posoc04g02900
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_18_RagTag.528, evm.TU.Scaffold_3_RagTag.652 ...
evm.TU.Scaffold_4_RagTag.741
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-1321, nbisL1-mrna-28615
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-4972
Rhizophoraceae Kandelia candel 1 add.evm.TU.utg000019l.347
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-18838, nbisL1-mrna-22570, nbisL1-mrna-22576
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-19237
Salicaceae Populus euphratica 2 populus_peu20810, populus_peu20825
Solanaceae Lycium barbarum 1 gene-LOC132601598
Solanaceae Solanum chilense 2 SOLCI003031700, SOLCI005596100
Solanaceae Solanum pennellii 1 gene-LOC107006244
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.