Basic Information
Locus ID:
nbis-gene-55826
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
regulatory protein NPR3-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc01358.1 | 363 | 2290 | - | nbis-gene-55826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 35,567.91 Da | 75.46 | 87.03 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54695 | POZ domain | 199 | 321 | 2.83E-7 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 171 | 323 | 8.6E-12 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 199 | 281 | 11.254053 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 154 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19660.1 | NPR1-like protein 4. Encodes a ankyrin repeat BTB/POZ domain-containing protein with 36% sequence identity with NPR1. Mutants are more susceptible to the bacterial pathogen Pseudomonas syringe pv. tomato DC3000 and to the fungal pathogen Erysiphe cichoracearum, but do not differ markedly from wild type in interaction with virulent and avirulent strains of the oomycete Peronospora parasitica. NPR4 is required for basal defense against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways. | 0 |
| RefSeq | XP_003561461.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR3 [Brachypodium distachyon] | 0 |
| Q75HA6 | BTB/POZ domain and ankyrin repeat-containing protein NPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811N0F1 | BTB domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS9447 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag4G01645 |
| Brassicaceae | Brassica nigra | 5 | BniB02g071280.2N, BniB03g042370.2N, BniB05g042850.2N ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-55826 |