Basic Information
Locus ID:
nbis-gene-55798
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc01309.1 | 1798 | 2353 | - | nbis-gene-55798 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 16,733.73 Da | 24.91 | 83.64 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 1 | 137 | 1.37861E-69 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 3 | 125 | 5.6E-16 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 2 | 149 | 7.86E-36 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 1 | 136 | 4.7E-46 | - |
| Coils | Coil | Coil | 98 | 118 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_002439941.1 | pyruvate decarboxylase 1 [Sorghum bicolor] | 0 |
| P28516 | Pyruvate decarboxylase 1 OS=Zea mays OX=4577 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | Q00KE1 | pyruvate decarboxylase (Fragment) OS=Coix lacryma-jobi OX=4505 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology