Basic Information
Locus ID:
nbis-gene-5555
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00004.1 | 3099199 | 3102183 | - | nbis-gene-5555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.11 | 24,512.09 Da | 60.78 | 67.14 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 81 | 175 | 2.2E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 81 | 177 | 3.31E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 17 | 198 | 6.0E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 178 | 9.672616 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17220.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039773526.1 | probable serine/threonine-protein kinase PIX13 [Panicum virgatum] | 0 |
| Q9SII6 | Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9TU21 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_38379 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg55190 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30239250 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00020315, Pov_00020316, Pov_00020317 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g12300.1 |
| Poaceae | Zea mays | 1 | Zm00001eb031180_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-52105, nbis-gene-5555 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-167, nbisL1-mrna-23555 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015265 |