Basic Information
Locus ID:
nbis-gene-55182
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00511.1 | 5758 | 6801 | + | nbis-gene-55182 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 34,087.78 Da | 54.61 | 95.20 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 167 | 210 | 2.96117E-17 | - |
| Pfam | PF13639 | Ring finger domain | 167 | 210 | 7.5E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 162 | 216 | 2.0E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 143 | 219 | 8.3E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 168 | 209 | 2.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 168 | 210 | 12.887609 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20030.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_004960965.2 | putative RING-H2 finger protein ATL12 [Setaria italica] | 0 |
| Q9SL78 | Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana OX=3702 GN=ATL12 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9U929 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_36286 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology