halophFGD

Basic Information

Locus ID: nbis-gene-54430

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: TPL-binding domain in jasmonate signalling

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00234.1	48371	48898	+	nbis-gene-54430

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.08	20,273.61 Da	52.99	100.86	0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13966	zinc-binding in reverse transcriptase	16	81	4.2E-21	IPR026960

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_002454271.2	uncharacterized protein LOC8066422 [Sorghum bicolor]	0
TrEMBL	A0A1E5WJF9	zf-RVT domain-containing protein (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0001517 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	1	gene_15553
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000031727
Asteraceae	Flaveria trinervia	30	Ftri10G20412, Ftri10G33243, Ftri12G02514, Ftri12G08305 ... Ftri12G30924, Ftri13G08657, Ftri13G26094, Ftri13G30350, Ftri15G16888, Ftri15G24875, Ftri16G05122, Ftri16G24418, Ftri16G29669, Ftri16G30269, Ftri17G17651, Ftri17G30072, Ftri18G01709, Ftri18G05932, Ftri18G08795, Ftri18G11264, Ftri1G02664, Ftri3G11379, Ftri4G17008, Ftri4G32487, Ftri5G00239, Ftri5G00971, Ftri5G08115, Ftri8G05997, Ftri8G12221, Ftri9G24284
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno13g05290
Plantaginaceae	Plantago ovata	4	Pov_00007688, Pov_00012778, Pov_00020452, Pov_00028875
Plumbaginaceae	Limonium bicolor	1	Lb2G11920
Poaceae	Echinochloa crus-galli	22	AH01.4072, AH01.4286, AH01.5179, AH03.2975, AH04.816 ... AH05.2234, AH06.2570, AH08.2233, BH02.1198, BH02.222, BH04.1914, BH05.3851, BH05.807, BH07.501, BH07.91, BH09.3009, CH02.3876, CH03.2109, CH05.3703, CH05.823, CH07.905, CH09.1898
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_4AG0310820, gene-QOZ80_5AG0395840 ... gene-QOZ80_6AG0527250
Poaceae	Hordeum vulgare	53	HORVU.MOREX.r3.1HG0031030.1.CDS1 ... HORVU.MOREX.r3.1HG0031680.1.CDS1, HORVU.MOREX.r3.1HG0035170.1.CDS1, HORVU.MOREX.r3.1HG0045570.1.CDS1, HORVU.MOREX.r3.1HG0047260.1.CDS1, HORVU.MOREX.r3.1HG0064370.1.CDS1, HORVU.MOREX.r3.1HG0088420.1.CDS1, HORVU.MOREX.r3.2HG0103040.1.CDS1, HORVU.MOREX.r3.2HG0106070.1.CDS1, HORVU.MOREX.r3.2HG0106080.1.CDS1, HORVU.MOREX.r3.2HG0110340.1.CDS1, HORVU.MOREX.r3.2HG0155900.1.CDS1, HORVU.MOREX.r3.2HG0155970.1.CDS1, HORVU.MOREX.r3.2HG0156400.1, HORVU.MOREX.r3.2HG0156470.1.CDS1, HORVU.MOREX.r3.2HG0194100.1.CDS1, HORVU.MOREX.r3.3HG0232100.1.CDS1, HORVU.MOREX.r3.3HG0241680.1.CDS1, HORVU.MOREX.r3.3HG0241940.1.CDS1, HORVU.MOREX.r3.3HG0259430.1.CDS1, HORVU.MOREX.r3.3HG0263750.1.CDS1, HORVU.MOREX.r3.3HG0263780.1.CDS1, HORVU.MOREX.r3.3HG0263830.1.CDS1, HORVU.MOREX.r3.3HG0275930.1, HORVU.MOREX.r3.3HG0278880.1.CDS1, HORVU.MOREX.r3.3HG0283150.1.CDS1, HORVU.MOREX.r3.4HG0366810.1.CDS1, HORVU.MOREX.r3.4HG0367520.1.CDS1, HORVU.MOREX.r3.4HG0376060.1.CDS1, HORVU.MOREX.r3.4HG0414720.1, HORVU.MOREX.r3.5HG0428150.1, HORVU.MOREX.r3.5HG0454990.1.CDS1, HORVU.MOREX.r3.5HG0456730.1.CDS1, HORVU.MOREX.r3.5HG0467830.1.CDS1, HORVU.MOREX.r3.5HG0473550.1.CDS1, HORVU.MOREX.r3.5HG0484380.1.CDS1, HORVU.MOREX.r3.6HG0566050.1.CDS1, HORVU.MOREX.r3.6HG0576160.1.CDS1, HORVU.MOREX.r3.6HG0578200.1.CDS1, HORVU.MOREX.r3.6HG0594200.1.CDS1, HORVU.MOREX.r3.6HG0597520.1.CDS1, HORVU.MOREX.r3.6HG0602820.1.CDS1, HORVU.MOREX.r3.6HG0607670.1.CDS1, HORVU.MOREX.r3.6HG0609410.1.CDS1, HORVU.MOREX.r3.6HG0623590.1.CDS1, HORVU.MOREX.r3.6HG0632190.1.CDS1, HORVU.MOREX.r3.7HG0643870.1.CDS1, HORVU.MOREX.r3.7HG0650590.1.CDS1, HORVU.MOREX.r3.7HG0676730.1.CDS1, HORVU.MOREX.r3.7HG0722160.1.CDS1, HORVU.MOREX.r3.7HG0729580.1.CDS1, HORVU.MOREX.r3.7HG0734700.1.CDS1, HORVU.MOREX.r3.7HG0751400.1.CDS1
Poaceae	Lolium multiflorum	62	gene-QYE76_001722, gene-QYE76_003634, gene-QYE76_005818 ... gene-QYE76_007277, gene-QYE76_008012, gene-QYE76_008121, gene-QYE76_008268, gene-QYE76_008635, gene-QYE76_008664, gene-QYE76_008940, gene-QYE76_009843, gene-QYE76_010872, gene-QYE76_011430, gene-QYE76_011576, gene-QYE76_012103, gene-QYE76_015395, gene-QYE76_015685, gene-QYE76_017211, gene-QYE76_017324, gene-QYE76_019405, gene-QYE76_019940, gene-QYE76_020199, gene-QYE76_020596, gene-QYE76_023545, gene-QYE76_026296, gene-QYE76_026894, gene-QYE76_030234, gene-QYE76_030654, gene-QYE76_031089, gene-QYE76_032842, gene-QYE76_033286, gene-QYE76_034077, gene-QYE76_034103, gene-QYE76_034265, gene-QYE76_037342, gene-QYE76_038659, gene-QYE76_039933, gene-QYE76_039981, gene-QYE76_041575, gene-QYE76_043113, gene-QYE76_043552, gene-QYE76_045719, gene-QYE76_048296, gene-QYE76_049069, gene-QYE76_050150, gene-QYE76_052515, gene-QYE76_056797, gene-QYE76_057097, gene-QYE76_058423, gene-QYE76_059867, gene-QYE76_060106, gene-QYE76_060703, gene-QYE76_060830, gene-QYE76_061071, gene-QYE76_062946, gene-QYE76_064118, gene-QYE76_064951, gene-QYE76_067068, gene-QYE76_067255, gene-QYE76_067870, gene-QYE76_070148, gene-QYE76_070731
Poaceae	Oryza coarctata	10	Oco01G001980, Oco02G030260, Oco10G006380, Oco10G007770 ... Oco13G008770, Oco14G014750, Oco17G008150, Oco18G003250, Oco21G008340, Oco24G003360
Poaceae	Oryza sativa	5	LOC_Os04g20550.1, LOC_Os08g06590.1, LOC_Os08g41054.1 ... LOC_Os09g23390.1, LOC_Os11g35820.1
Poaceae	Paspalum vaginatum	25	gene-BS78_01G114100, gene-BS78_01G123700, gene-BS78_K077700 ... gene-BS78_01G177100, gene-BS78_03G040700, gene-BS78_03G135900, gene-BS78_03G355400, gene-BS78_04G300500, gene-BS78_05G167800, gene-BS78_05G202800, gene-BS78_05G233700, gene-BS78_05G288800, gene-BS78_06G021200, gene-BS78_07G130200, gene-BS78_07G191800, gene-BS78_07G205700, gene-BS78_08G042700, gene-BS78_08G092700, gene-BS78_08G173700, gene-BS78_09G086300, gene-BS78_09G118100, gene-BS78_09G153900, gene-BS78_10G005700, gene-BS78_10G083400, gene-BS78_K320300
Poaceae	Puccinellia tenuiflora	28	Pt_Chr0100114, Pt_Chr0100224, Pt_Chr0100927, Pt_Chr0105232 ... Pt_Chr0201718, Pt_Chr0205344, Pt_Chr0205380, Pt_Chr0205839, Pt_Chr0207007, Pt_Chr0303070, Pt_Chr0303096, Pt_Chr0303097, Pt_Chr0307264, Pt_Chr0404160, Pt_Chr0500401, Pt_Chr0501499, Pt_Chr0502476, Pt_Chr0502762, Pt_Chr0504972, Pt_Chr0600790, Pt_Chr0603223, Pt_Chr0603445, Pt_Chr0605906, Pt_Chr0700859, Pt_Chr0703273, Pt_Chr0705252, Pt_Ctg00097, Pt_Ctg00368
Poaceae	Sporobolus alterniflorus	44	Chr01G006180, Chr01G010730, Chr02G012690, Chr02G022710 ... Chr02G023000, Chr03G010260, Chr05G011930, Chr05G023440, Chr05G030270, Chr06G006530, Chr07G012350, Chr08G009620, Chr08G015070, Chr09G017030, Chr0G002360, Chr0G005970, Chr10G013850, Chr12G007580, Chr12G010110, Chr13G014360, Chr13G016220, Chr15G008100, Chr15G008260, Chr15G010570, Chr15G011190, Chr16G011910, Chr16G012590, Chr16G015260, Chr17G005530, Chr17G010880, Chr18G002120, Chr19G003700, Chr19G014860, Chr22G004730, Chr22G005900, Chr22G014390, Chr23G006020, Chr25G006230, Chr25G012290, Chr25G014890, Chr27G000110, Chr27G000910, Chr28G008380, Chr30G006730
Poaceae	Triticum dicoccoides	5	gene_TRIDC1AG036730, gene_TRIDC3AG022030 ... gene_TRIDC3BG033630, gene_TRIDC7AG027550, gene_TRIDC7BG018330
Poaceae	Triticum aestivum	1	TraesCS2A02G239400.1
Poaceae	Zea mays	2	Zm00001eb279530_P001, Zm00001eb431450_P001
Poaceae	Zoysia japonica	14	nbis-gene-11598, nbis-gene-19612, nbis-gene-19782 ... nbis-gene-24625, nbis-gene-29145, nbis-gene-34469, nbis-gene-37022, nbis-gene-39964, nbis-gene-43689, nbis-gene-45472, nbis-gene-54430, nbis-gene-54555, nbis-gene-55161, nbis-gene-9007
Poaceae	Zoysia macrostachya	2	Zma_g17653, Zma_g24925