HalophFGD

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Basic Information
Locus ID: nbis-gene-54288
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description: Protein of unknown function (DUF295)
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00224.1 10508 11893 + nbis-gene-54288
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.33 51,531.28 Da 50.62 84.38 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 380 418 5.6E-10 IPR005174
Pfam PF00646 F-box domain 5 40 8.6E-4 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq NP_001169200.1 uncharacterized protein LOC100383053 [Zea mays] 0
TrEMBL A0A5J9TW31 DUF295 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39153 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium album 1 gene:ENSEOMG00000029071
Apiaceae Apium graveolens 1 Ag10G00760
Poaceae Echinochloa crus-galli 14 AH01.4084, AH02.1851, AH02.1852, AH05.3002, AH07.2695 ...
BH02.1888, BH05.3052, BH07.2521, BH07.2522, BH09.1446, BH09.1447, CH05.3070, CH07.2583, CH09.1557
Poaceae Eleusine coracana subsp. coracana 14 gene-QOZ80_1AG0036900, gene-QOZ80_1BG0086930 ...
gene-QOZ80_4AG0313820, gene-QOZ80_4AG0313860, gene-QOZ80_4AG0313900, gene-QOZ80_4BG0344960, gene-QOZ80_4BG0344970, gene-QOZ80_4BG0344980, gene-QOZ80_4BG0345040, gene-QOZ80_4BG0345060, gene-QOZ80_5AG0366350, gene-QOZ80_5BG0414130, gene-QOZ80_5BG0414140, gene-QOZ80_8BG0662360
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.2HG0107280.1.CDS1 ...
HORVU.MOREX.r3.2HG0107320.1.CDS1, HORVU.MOREX.r3.2HG0107350.1.CDS1, HORVU.MOREX.r3.2HG0174820.1.CDS1, HORVU.MOREX.r3.3HG0221070.1.CDS1
Poaceae Lolium multiflorum 8 gene-QYE76_009182, gene-QYE76_019489, gene-QYE76_026177 ...
gene-QYE76_026790, gene-QYE76_026847, gene-QYE76_028626, gene-QYE76_028758, gene-QYE76_044666
Poaceae Oryza coarctata 8 Oco07G008360, Oco07G008480, Oco08G008260, Oco14G006340 ...
Oco15G001090, Oco15G001100, Oco16G001230, Oco16G001240
Poaceae Oryza sativa 5 LOC_Os04g39660.1, LOC_Os07g23890.1, LOC_Os08g03300.1 ...
LOC_Os08g03320.1, LOC_Os08g03330.1
Poaceae Paspalum vaginatum 4 gene-BS78_01G420300, gene-BS78_06G131300, gene-BS78_K005000 ...
gene-BS78_06G132900
Poaceae Puccinellia tenuiflora 7 Pt_Chr0200459, Pt_Chr0200460, Pt_Chr0200473, Pt_Chr0302381 ...
Pt_Chr0302382, Pt_Chr0404403, Pt_Chr0404406
Poaceae Sporobolus alterniflorus 14 Chr02G007040, Chr0G009410, Chr11G023100, Chr13G006840 ...
Chr18G013930, Chr22G003650, Chr23G010790, Chr23G010800, Chr23G010810, Chr25G008950, Chr26G008910, Chr26G008920, Chr26G008960, Chr30G008830
Poaceae Thinopyrum elongatum 3 Tel2E01G582500, Tel2E01G583000, Tel4E01G012600
Poaceae Triticum dicoccoides 3 gene_TRIDC2AG048650, gene_TRIDC2BG051310 ...
gene_TRIDC4BG001430
Poaceae Triticum aestivum 16 TraesCS2A02G078500.1.cds1, TraesCS2A02G078600.1.cds1 ...
TraesCS2A02G329500.1.cds1, TraesCS2A02G329600.1.cds1, TraesCS2A02G329900.1.cds1, TraesCS2B02G093700.1.cds1, TraesCS2B02G352400.1.cds1, TraesCS2B02G352800.1.cds1, TraesCS2D02G332800.1.cds1, TraesCS2D02G333200.1.cds1, TraesCS3B02G606000.1, TraesCS4A02G310900.1.cds1, TraesCS4A02G311500.1.cds1, TraesCS4D02G002600.1.cds1, TraesCS5A02G054600.1.cds1, TraesCSU02G054900.1
Poaceae Zea mays 4 Zm00001eb031200_P001, Zm00001eb061950_P001 ...
Zm00001eb079930_P001, Zm00001eb424780_P001
Poaceae Zoysia japonica 3 nbis-gene-25133, nbis-gene-54288, nbis-gene-7419
Poaceae Zoysia macrostachya 2 Zma_g21451, Zma_g28599
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.