Basic Information
Locus ID:
nbis-gene-53944
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00204.1 | 116021 | 118043 | - | nbis-gene-53944 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 48,217.47 Da | 51.79 | 87.07 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 119 | 176 | 1.11278E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 211 | 319 | 6.5E-20 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 197 | 320 | 1.04E-26 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 119 | 178 | 5.4E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 191 | 351 | 5.6E-42 | IPR011333 |
| SMART | SM00225 | BTB_4 | 216 | 320 | 3.8E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 216 | 287 | 16.07296 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039793109.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q717B4 | TD and POZ domain-containing protein 3 OS=Mus musculus OX=10090 GN=Tdpoz3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9W114 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_14488 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0554960, gene-QOZ80_7BG0586030 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr24G001820 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-53944 |