Basic Information
Locus ID:
nbis-gene-53069
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00172.1 | 130387 | 142961 | - | nbis-gene-53069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 88,894.76 Da | 49.66 | 90.05 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 566 | 640 | 4.8E-8 | IPR001245 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 259 | 503 | 8.53E-10 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 544 | 638 | 4.85E-13 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 100 | 236 | 2.5E-7 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 257 | 504 | 2.8E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 640 | 726 | 4.7E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 545 | 639 | 2.2E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 562 | 809 | 11.340428 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 809 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29050.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_025825271.1 | L-type lectin-domain containing receptor kinase IV.2-like [Panicum hallii] | 0 |
| Q9SZD5 | L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana OX=3702 GN=LECRK59 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WRR0 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_01942 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH09.63 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0689160, gene-QOZ80_9BG0715160 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K222900 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr0G006230 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G942000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG077050, gene_TRIDC2BG084460 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2B02G584100.1, TraesCS2D02G554400.1 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-53069, nbis-gene-53070, nbis-gene-56673 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19250 |