Basic Information
Locus ID:
nbis-gene-52774
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
5
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00164.1 | 227853 | 230708 | - | nbis-gene-52774 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 27,835.04 Da | 53.39 | 85.85 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 88 | 157 | 4.67238E-26 | - |
| CDD | cd14733 | BACK | 175 | 229 | 1.93833E-5 | - |
| Pfam | PF00651 | BTB/POZ domain | 88 | 172 | 4.2E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 88 | 172 | 1.22E-24 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 176 | 247 | 9.1E-11 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 59 | 175 | 9.8E-30 | IPR011333 |
| SMART | SM00225 | BTB_4 | 61 | 174 | 5.8E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 61 | 144 | 16.879559 | IPR000210 |
| Coils | Coil | Coil | 22 | 42 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08455.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_004955924.1 | BTB/POZ domain-containing protein At4g08455 [Setaria italica] | 0 |
| Q6DBN1 | BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana OX=3702 GN=At4g08455 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SV28 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_13213 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg12051, jg6438 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22954 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah024168 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g010330 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg28314, Sbi_jg28317, Sbi_jg51363 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg7160, Seu_jg7163 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020153 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl11682, Sgl11683, Sgl17182, Sgl17183, Sgl17196 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015948, gene:ENSEOMG00000036180 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0013130, CQ.Regalona.r1.1BG0012930 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30044500, pistato.v30044520 |
| Apiaceae | Apium graveolens | 1 | Ag7G02091 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G020260 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103702610 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2758.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri10G19431 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G08455.1 |
| Brassicaceae | Eutrema salsugineum | 5 | Thhalv10016014m.g.v1.0, Thhalv10023183m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g09470.v2.2, Sp6g09480.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g034530.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1884 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2024 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g08880 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g13290 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5261 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.817 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00022673, Pov_00037865 |
| Plumbaginaceae | Limonium bicolor | 5 | Lb0G37297, Lb3G19673, Lb4G24392, Lb7G34071, Lb8G35927 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.753, BH03.890, CH03.996 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_7AG0562320 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0546130.1 |
| Poaceae | Oryza coarctata | 2 | Oco13G004700, Oco14G005470 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g15490.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G114600 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr19G015530, Chr24G004750, Chr28G004090 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G119200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG005500, gene_TRIDC6BG008100 |
| Poaceae | Triticum aestivum | 4 | TraesCS6A02G045900.1, TraesCS6A02G046100.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb304620_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-26518, nbis-gene-52774 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g4995, Zma_g6246 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g11290 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.601 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-9651 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2492 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18157 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000018l.617, evm.TU.utg000018l.618 |
| Rhizophoraceae | Kandelia obovata | 4 | Maker00002828, Maker00002971, Maker00003012, Maker00003249 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2892 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20437 |
| Salicaceae | Populus euphratica | 2 | populus_peu14792, populus_peu32468 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132606296 |
| Solanaceae | Solanum chilense | 1 | SOLCI002928100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009030 |
| Zosteraceae | Zostera marina | 1 | Zosma05g16350.v3.1 |