Basic Information
Locus ID:
nbis-gene-52690
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00162.1 | 215149 | 219308 | - | nbis-gene-52690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 25,839.30 Da | 29.97 | 79.59 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14132 | STKc_CK2_alpha | 15 | 206 | 1.19535E-123 | - |
| Pfam | PF00069 | Protein kinase domain | 72 | 205 | 1.1E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 26 | 209 | 5.74E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 39 | 218 | 2.8E-50 | - |
| SMART | SM00220 | serkin_6 | 34 | 205 | 8.1E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 205 | 24.145832 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 82 | 94 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50000.1 | casein kinase II, alpha chain 2. casein kinase II catalytic subunit alpha | 0 |
| RefSeq | XP_052727834.1 | casein kinase II subunit alpha-1 isoform X3 [Vigna angularis] | 0 |
| P28523 | Casein kinase II subunit alpha OS=Zea mays OX=4577 GN=ACK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0VCI7 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG002700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology