HalophFGD

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Basic Information
Locus ID: nbis-gene-5246
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00004.1 1910391 1910702 + nbis-gene-5246
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.82 10,901.00 Da 50.55 75.05 -0.22
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039797038.1 uncharacterized protein LOC120662041 [Panicum virgatum] 0
TrEMBL A0A811NK65 F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS15288 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH03.3902, AH03.3918, AH03.3919, BH03.4191, BH03.4208 ...
CH07.287, Contig181.19
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_2AG0105390, gene-QOZ80_2BG0158860 ...
gene-QOZ80_7BG0611060, gene-QOZ80_8BG0652150
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.2HG0112990.2, HORVU.MOREX.r3.5HG0531720.1 ...
HORVU.MOREX.r3.2HG0119130.1.CDS1, HORVU.MOREX.r3.5HG0531850.1, HORVU.MOREX.r3.5HG0531930.1, HORVU.MOREX.r3.5HG0531960.1, HORVU.MOREX.r3.5HG0532100.1
Poaceae Lolium multiflorum 13 gene-QYE76_001376, gene-QYE76_035379, gene-QYE76_038799 ...
gene-QYE76_038947, gene-QYE76_039227, gene-QYE76_046284, gene-QYE76_046322, gene-QYE76_060244, gene-QYE76_060246, gene-QYE76_060247, gene-QYE76_060269, gene-QYE76_060272, gene-QYE76_060273
Poaceae Oryza coarctata 6 Oco05G005810, Oco05G005830, Oco06G005980, Oco13G014200 ...
Oco13G014520, Oco14G015090
Poaceae Oryza sativa 2 LOC_Os07g45010.1, LOC_Os07g45050.1
Poaceae Paspalum vaginatum 4 gene-BS78_02G373000, gene-BS78_05G160500, gene-BS78_K157300 ...
gene-BS78_K157400
Poaceae Puccinellia tenuiflora 20 Pt_Chr0105210, Pt_Chr0106234, Pt_Chr0106236, Pt_Chr0106238 ...
Pt_Chr0106239, Pt_Chr0106242, Pt_Chr0106247, Pt_Chr0106249, Pt_Chr0106252, Pt_Chr0106261, Pt_Chr0106266, Pt_Chr0106277, Pt_Chr0106345, Pt_Chr0106378, Pt_Chr0201295, Pt_Chr0301122, Pt_Chr0304904, Pt_Chr0305530, Pt_Ctg00080, Pt_Ctg00084
Poaceae Sporobolus alterniflorus 2 Chr0G002930, Chr27G016370
Poaceae Thinopyrum elongatum 14 Tel2E01G236700, Tel2E01G236800, Tel2E01G288000 ...
Tel2E01G288900, Tel2E01G972700, Tel5E01G818500, Tel5E01G819100, Tel5E01G820600, Tel5E01G820700, Tel5E01G821400, Tel5E01G821600, Tel5E01G822100, Tel5E01G822300, Tel5E01G824800
Poaceae Triticum dicoccoides 16 gene_TRIDC2AG013140, gene_TRIDC2AG017730 ...
gene_TRIDC2AG078710, gene_TRIDC2BG021490, gene_TRIDC4AG052070, gene_TRIDC4AG052220, gene_TRIDC4AG052290, gene_TRIDC5AG025170, gene_TRIDC5BG078190, gene_TRIDC5BG078340, gene_TRIDC5BG078380, gene_TRIDC5BG078500, gene_TRIDC5BG078510, gene_TRIDC5BG078530, gene_TRIDC5BG078540, gene_TRIDC7AG054630
Poaceae Triticum aestivum 32 TraesCS2A02G142200.1, TraesCS2A02G586000.1 ...
TraesCS2B02G128000.1, TraesCS2B02G128200.1, TraesCS2B02G167400.1, TraesCS2B02G597100.1, TraesCS2B02G597200.1, TraesCS2D02G110200.1, TraesCS2D02G110300.1, TraesCS2D02G600600.2, TraesCS4A02G343600.1, TraesCS4A02G344300.1, TraesCS4A02G346700.2, TraesCS4A02G347400.1, TraesCS4A02G348000.1, TraesCS5A02G150600.1, TraesCS5A02G407900.2, TraesCS5B02G412800.1, TraesCS5B02G526100.1, TraesCS5B02G526400.2, TraesCS5B02G527200.1, TraesCS5B02G530600.1, TraesCS5D02G155700.3, TraesCS5D02G417800.1, TraesCS5D02G525800.1, TraesCS5D02G526500.1, TraesCS5D02G526700.1, TraesCS5D02G527300.1, TraesCS5D02G527400.1, TraesCS5D02G529400.1, TraesCS7A02G393200.1, TraesCSU02G062100.2
Poaceae Zoysia japonica 1 nbis-gene-5246
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