Basic Information
Locus ID:
nbis-gene-52068
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00152.1 | 75053 | 76489 | - | nbis-gene-52068 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 41,344.96 Da | 44.09 | 98.41 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 91 | 354 | 1.1E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 356 | 4.1E-57 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 62 | 166 | 2.6E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 167 | 374 | 3.3E-40 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 89 | 377 | 30.350658 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 95 | 117 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 213 | 225 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G33260.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_025806635.1 | probable receptor-like protein kinase At1g33260 [Panicum hallii] | 0 |
| A2XW02 | Salt tolerance receptor-like cytoplasmic kinase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16820 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7E9X5 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G157900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH07.148, BH07.3415, BH07.51, CH03.4777 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0098830, gene-QOZ80_2BG0152310 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0542320.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_019130, gene-QYE76_019396 |
| Poaceae | Oryza coarctata | 1 | Oco04G000400 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g01730.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G006700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0200841 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr06G036200, Chr0G010420, Chr0G010730 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G074100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG002880, gene_TRIDC6BG003870 |
| Poaceae | Triticum aestivum | 2 | TraesCS6A02G024700.1, TraesCS6B02G033600.1 |
| Poaceae | Zea mays | 2 | Zm00001eb209790_P001, Zm00001eb229530_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52068 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12048 |