Basic Information
Locus ID:
nbis-gene-52041
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00151.1 | 374599 | 377862 | - | nbis-gene-52041 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 56,755.88 Da | 42.34 | 80.72 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13499 | EF-hand domain pair | 315 | 375 | 3.4E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 75 | 222 | 1.1E-39 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 387 | 446 | 2.2E-12 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 299 | 448 | 5.03E-42 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 273 | 5.26E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 65 | 226 | 8.8E-48 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 276 | 448 | 9.7E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 227 | 270 | 1.6E-5 | - |
| SMART | SM00220 | serkin_6 | 75 | 278 | 8.8E-36 | IPR000719 |
| SMART | SM00054 | efh_1 | 388 | 416 | 5.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 352 | 380 | 0.014 | IPR002048 |
| SMART | SM00054 | efh_1 | 421 | 449 | 2.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 316 | 344 | 5.3E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 312 | 347 | 15.601326 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 384 | 419 | 15.963966 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 348 | 383 | 9.018011 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 422 | 452 | 12.755995 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 380 | 26.36487 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 361 | 373 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 195 | 207 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 81 | 104 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 430 | 442 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 397 | 409 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 325 | 337 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_020406694.1 | calcium-dependent protein kinase 29 [Zea mays] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A804N480 | Calcium-dependent protein kinase 30 OS=Zea mays OX=4577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology