Basic Information
Locus ID:
nbis-gene-51334
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00142.1 | 512865 | 516983 | + | nbis-gene-51334 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 51,157.88 Da | 42.73 | 79.34 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 145 | 195 | 3.79E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 283 | 358 | 6.67E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 250 | 387 | 4.8E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 152 | 199 | 6.6E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 152 | 188 | 8.649649 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 102 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002445195.1 | F-box/LRR-repeat protein At2g29910 [Sorghum bicolor] | 0 |
| TrEMBL | A0A811PTW5 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS31232 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology