Basic Information
Locus ID:
nbis-gene-51272
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00142.1 | 99831 | 104056 | + | nbis-gene-51272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 61,130.46 Da | 53.21 | 69.71 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 402 | 504 | 1.7E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 386 | 504 | 1.84E-29 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 378 | 524 | 1.4E-35 | IPR011333 |
| SMART | SM00225 | BTB_4 | 404 | 510 | 7.0E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 404 | 471 | 18.947758 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 238 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_039855205.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5V887 | BTB/POZ and MATH domain-containing protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017607 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0623030, gene-QOZ80_8BG0651030 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G089700, gene-BS78_K171200 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-51272, nbis-gene-891 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g22660, Zma_g22661 |