Basic Information
Locus ID:
nbis-gene-51235
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
GTPase-activator protein for Rho-like GTPases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00141.1 | 436973 | 443357 | - | nbis-gene-51235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 56,520.16 Da | 53.25 | 77.43 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 396 | 481 | 3.6E-18 | IPR025757 |
| SUPERFAMILY | SSF50729 | PH domain-like | 63 | 125 | 5.58E-6 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 167 | 269 | 8.83E-8 | IPR008936 |
| ProSiteProfiles | PS50003 | PH domain profile. | 1 | 119 | 7.2406 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 373 | - | - |
| Coils | Coil | Coil | 384 | 425 | - | - |
| Coils | Coil | Coil | 457 | 477 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24580.3 | - | 0 |
| RefSeq | XP_034589694.1 | rho GTPase-activating protein REN1-like isoform X2 [Setaria viridis] | 0 |
| F4JQZ3 | Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana OX=3702 GN=REN1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9SQL6 | Rho GTPase-activating protein REN1 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_53344 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology