Basic Information
Locus ID:
nbis-gene-51169
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00141.1 | 135561 | 136291 | - | nbis-gene-51169 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 20,980.15 Da | 72.68 | 94.62 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 77 | 137 | 1.88E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 145 | 2.1E-7 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 83 | 132 | 9.981268 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 98 | 107 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 176 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_039806234.1 | probable E3 ubiquitin-protein ligase XBOS36 [Panicum virgatum] | 0 |
| Q4JHE0 | Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS36 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TPX7 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_46564 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology