Basic Information
Locus ID:
nbis-gene-50886
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00138.1 | 2 | 622 | - | nbis-gene-50886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.82 | 13,444.63 Da | 45.69 | 105.44 | 0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025819246.1 | putative RING-H2 finger protein ATL69 [Panicum hallii] | 0 |
| TrEMBL | A0A835E5V3 | RING-type domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_050607 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH07.1150, CH07.928 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0107810, gene-QOZ80_2BG0161430 |
| Poaceae | Oryza coarctata | 1 | Oco04G007070 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G104300 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr0G013670, Chr0G033250, Chr15G023330 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-50886 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12516 |