Basic Information
Locus ID:
nbis-gene-50727
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00135.1 | 279409 | 282766 | - | nbis-gene-50727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 51,425.85 Da | 45.36 | 105.91 | 0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 340 | 476 | 2.7E-11 | IPR011701 |
| Pfam | PF00083 | Sugar (and other) transporter | 106 | 295 | 6.4E-25 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 50 | 474 | 1.31E-50 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 61 | 478 | 7.6E-63 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 74 | 469 | 32.007549 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 345 | 360 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_025802796.1 | organic cation/carnitine transporter 7-like [Panicum hallii] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SHS2 | MFS domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_55864 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology