Basic Information
Locus ID:
nbis-gene-50486
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00132.1 | 481932 | 486855 | - | nbis-gene-50486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.80 | 99,127.03 Da | 54.10 | 82.13 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 435 | 519 | 6.2E-13 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 107 | 146 | 9.9E-12 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 781 | 848 | 4.5E-5 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 521 | 3.32E-23 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 107 | 311 | 4.65E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 408 | 506 | 1.4E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 764 | 864 | 2.6E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 106 | 327 | 1.3E-47 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 431 | 855 | 8.881112 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 437 | 459 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 682 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_008664636.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X5 [Zea mays] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804LW49 | Protein kinase domain-containing protein OS=Zea mays OX=4577 GN=103643259 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Zoysia japonica | 2 | nbis-gene-17076, nbis-gene-50486 |