Basic Information
Locus ID:
nbis-gene-50425
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
F-box FBD LRR-repeat protein At4g03220
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00132.1 | 186762 | 189946 | + | nbis-gene-50425 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 34,315.03 Da | 55.24 | 102.55 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 27 | 62 | 7.0E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 175 | 298 | 3.53E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 68 | 6.54E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 307 | 1.9E-5 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 22 | 67 | 1.2E-5 | - |
| SMART | SM00256 | fbox_2 | 30 | 70 | 0.0084 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 24 | 74 | 9.206031 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49030.2 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_012698969.1 | putative FBD-associated F-box protein At5g56690 [Setaria italica] | 0 |
| Q9SMU0 | Putative F-box/FBD/LRR-repeat protein At3g49030 OS=Arabidopsis thaliana OX=3702 GN=At3g49030 PE=4 SV=1 | 0 | |
| TrEMBL | A0A5J9VY24 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_14004 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology