Basic Information
Locus ID:
nbis-gene-50357
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
NAC domain transcription factor superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00131.1 | 422245 | 426154 | + | nbis-gene-50357 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 41,601.76 Da | 56.24 | 67.83 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 78 | 184 | 2.0E-11 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 70 | 180 | 7.72E-18 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 86 | 197 | 3.5E-11 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 77 | 251 | 11.62042 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 266 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_034591543.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X2 [Setaria viridis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TL82 | NAC domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_45300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology