Basic Information
Locus ID:
nbis-gene-50201
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00129.1 | 529187 | 537021 | - | nbis-gene-50201 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 60,588.54 Da | 43.74 | 87.86 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 35 | 237 | 8.5516E-60 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 35 | 244 | 2.3E-40 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 377 | 3.56E-7 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 478 | 3.14E-5 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 237 | 9.97E-47 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 326 | 376 | 6.6E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 377 | 457 | 2.8E-12 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 28 | 246 | 6.9E-51 | - |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 123 | 129 | - | IPR019825 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 264 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03140.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_039799082.1 | L-type lectin-domain containing receptor kinase VIII.2-like [Panicum virgatum] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0U2B0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG135653 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology