Basic Information
Locus ID:
nbis-gene-50151
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00129.1 | 244162 | 248791 | + | nbis-gene-50151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.94 | 10,270.64 Da | 30.21 | 87.13 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 63 | 5.37E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 71 | 7.4E-10 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48210.4 | - | 0 |
| RefSeq | XP_025806527.1 | pto-interacting protein 1-like isoform X1 [Panicum hallii] | 0 |
| Q9LUT0 | Receptor-like cytoplasmic kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CARK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6R5Y9 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM06G07840 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_08.2985.V1.1, AsparagusV1_08.2986.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB08g035540.2N |
| Poaceae | Zoysia japonica | 1 | nbis-gene-50151 |
| Tamaricaceae | Tamarix chinensis | 4 | TC02G1743, TC05G0361, TC05G0510, TC12G1251 |