Basic Information
Locus ID:
nbis-gene-50044
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00128.1 | 279085 | 288620 | + | nbis-gene-50044 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 52,273.57 Da | 60.67 | 66.32 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 417 | 455 | 1.5E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 321 | 456 | 7.02E-19 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 319 | 375 | 2.6E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 475 | 4.3E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 133 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
| Coils | Coil | Coil | 448 | 468 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.7 | - | 0 |
| RefSeq | XP_002442325.1 | RGS domain-containing serine/threonine-protein kinase A [Sorghum bicolor] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804LQH3 | Protein kinase domain superfamily protein OS=Zea mays OX=4577 GN=100501094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology