Basic Information
Locus ID:
nbis-gene-50038
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00128.1 | 249337 | 251605 | - | nbis-gene-50038 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 53,272.36 Da | 80.54 | 51.83 | -1.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 346 | 427 | 1.0E-18 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 346 | 428 | 9.3E-27 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 402 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 167 | - | - |
| Coils | Coil | Coil | 380 | 406 | - | - |
| Coils | Coil | Coil | 345 | 372 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | NP_001183870.1 | uncharacterized protein LOC100502463 [Zea mays] | 0 |
| TrEMBL | A0A5J9WM34 | PAPA-1 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_01086 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology