Basic Information
Locus ID:
nbis-gene-49983
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00127.1 | 576690 | 583552 | - | nbis-gene-49983 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 40,682.88 Da | 40.40 | 80.27 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 174 | 249 | 8.0E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 251 | 1.02E-20 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 236 | 363 | 9.18E-14 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 314 | 1.8E-17 | - |
| SMART | SM00220 | serkin_6 | 138 | 330 | 3.9E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 341 | 9.460607 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 144 | 170 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_002467812.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Sorghum bicolor] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WI01 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_06487 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology