Basic Information
Locus ID:
nbis-gene-49353
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00120.1 | 343091 | 345254 | - | nbis-gene-49353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 68,793.61 Da | 45.72 | 87.21 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF19160 | SPARK | 24 | 175 | 3.9E-14 | IPR043891 |
| Pfam | PF00069 | Protein kinase domain | 339 | 602 | 4.2E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 320 | 606 | 1.62E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 413 | 624 | 1.3E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 412 | 1.1E-25 | - |
| SMART | SM00220 | serkin_6 | 338 | 611 | 3.8E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 338 | 610 | 36.2304 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 451 | 463 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 344 | 366 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 659 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 659 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 253 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24030.4 | - | 0 |
| RefSeq | XP_025801351.1 | proline-rich receptor-like protein kinase PERK3 [Panicum hallii] | 0 |
| Q84M95 | Probable serine/threonine-protein kinase PBL28 OS=Arabidopsis thaliana OX=3702 GN=PBL28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3GWZ2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G088100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | scaffold024094G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103717896 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g13010 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g29490 |
| Poaceae | Oryza coarctata | 1 | Oco14G004500 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g12480.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G104200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G003910, Chr28G003360 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-49353 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g4928 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g27770 |