Basic Information
Locus ID:
nbis-gene-49182
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00118.1 | 584431 | 589885 | - | nbis-gene-49182 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 50,905.59 Da | 47.44 | 74.41 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 347 | 390 | 3.25402E-5 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 49 | 91 | 1.2E-8 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 344 | 397 | 8.18E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 306 | 397 | 2.4E-10 | - |
| SMART | SM00181 | egf_5 | 297 | 346 | 56.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 350 | 397 | 0.0015 | IPR000742 |
| SMART | SM00179 | egfca_6 | 347 | 397 | 2.5E-8 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 347 | 397 | 8.590853 | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 372 | 383 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 347 | 381 | - | IPR018097 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_039793966.1 | wall-associated receptor kinase 4-like [Panicum virgatum] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9U437 | EGF-like domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_34301 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology