Basic Information
Locus ID:
nbis-gene-48631
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00113.1 | 157264 | 164657 | + | nbis-gene-48631 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 54,046.04 Da | 55.21 | 52.75 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 389 | 446 | 4.0E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 232 | 288 | 1.0E-23 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 380 | 448 | 7.72E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 229 | 290 | 2.62E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 220 | 291 | 2.2E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 373 | 449 | 1.1E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 388 | 447 | 5.3E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 231 | 289 | 5.0E-34 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 232 | 290 | 23.077669 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 383 | 448 | 36.839073 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 471 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 471 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_004962924.1 | probable WRKY transcription factor 3 [Setaria italica] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5W542 | Putative WRKY transcription factor 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006448 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology