Basic Information
Locus ID:
nbis-gene-48505
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00112.1 | 79509 | 85230 | - | nbis-gene-48505 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 41,615.13 Da | 59.33 | 73.60 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 342 | 370 | 1.5917E-4 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 335 | 379 | 1.45E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 311 | 384 | 2.4E-8 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 342 | 379 | 8.86004 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 0 |
| TrEMBL | A0A2S3I0K8 | RING-type domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G051500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology