Basic Information
Locus ID:
nbis-gene-4828
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00004.1 | 61911 | 70908 | - | nbis-gene-4828 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.84 | 20,284.95 Da | 52.06 | 81.92 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 79 | 8.6E-7 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 35 | 84 | 7.14E-11 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 31 | 96 | 1.6E-10 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 1 | 87 | 14.451713 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72230.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_004964956.1 | blue copper protein [Setaria italica] | 0 |
| Q41001 | Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TKS7 | Phytocyanin domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_45667 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for nbis-gene-4828.