Basic Information
Locus ID:
nbis-gene-48049
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00108.1 | 419970 | 424337 | - | nbis-gene-48049 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 24,173.15 Da | 46.98 | 78.66 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 156 | 227 | 5.9E-6 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 156 | 226 | 1.2E-9 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 92 | 231 | 1.8E-13 | IPR036259 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 50 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_025797075.1 | organic cation/carnitine transporter 7 isoform X2 [Panicum hallii] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7C6F5 | MFS domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G233400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology