Basic Information
Locus ID:
nbis-gene-47885
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
CHASE domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00107.1 | 370539 | 372142 | - | nbis-gene-47885 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 46,633.87 Da | 65.06 | 70.71 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 242 | 347 | 4.22E-12 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 192 | 242 | 1.9E-8 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 344 | 1.4E-20 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 399 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45330.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_025801917.1 | L-type lectin-domain containing receptor kinase S.4-like [Panicum hallii] | 0 |
| Q2QRN7 | Probable kinase CHARK OS=Oryza sativa subsp. japonica OX=39947 GN=CHARK PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TCY6 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42685 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0532760 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-31046, nbis-gene-47885 |