halophFGD

Basic Information

Locus ID: nbis-gene-47879

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: BTB And C-terminal Kelch

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00107.1	327551	331379	+	nbis-gene-47879

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.99	45,999.56 Da	48.01	70.59	-0.44

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07707	BTB And C-terminal Kelch	118	212	4.6E-8	IPR011705
SUPERFAMILY	SSF49599	TRAF domain-like	292	405	1.11E-5	-
Gene3D	G3DSA:1.25.40.420	-	127	234	1.4E-12	-
SMART	SM00875	BACK_2	107	213	0.0086	IPR011705

Best hit

Source	Best Hit ID	Description
TAIR	AT3G61600.1	POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1
RefSeq	XP_002438463.1	BTB/POZ domain-containing protein POB1 [Sorghum bicolor]
Swiss-Prot	Q9FPW6	BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2
TrEMBL	A0A5J9SHL8	BTB domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_42406 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg26897, jg29603, jg4751, jg5166, jg7673
Aizoaceae	Mesembryanthemum crystallinum	2	gene_1663, gene_1786
Amaranthaceae	Atriplex hortensis	2	Ah004517, Ah022908
Amaranthaceae	Beta vulgaris	2	BVRB_1g003710, BVRB_5g099550
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg23973, Sbi_jg4022, Sbi_jg49225, Sbi_jg7802
Amaranthaceae	Salicornia europaea	2	Seu_jg12231, Seu_jg6014
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00000528, GOSA_00001103
Amaranthaceae	Suaeda glauca	2	Sgl10986, Sgl16396
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000004194, gene:ENSEOMG00000014904 ... gene:ENSEOMG00000023873, gene:ENSEOMG00000024863, gene:ENSEOMG00000035143, gene:ENSEOMG00000046938
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0001620, CQ.Regalona.r1.2BG0025670 ... CQ.Regalona.r1.5AG0006390, CQ.Regalona.r1.5BG0006710
Anacardiaceae	Pistacia vera	2	pistato.v30005270, pistato.v30135020
Apiaceae	Apium graveolens	7	Ag5G01011, Ag6G00106, Ag6G01562, Ag8G00607, Ag8G00608 ... Ag8G00613, Ag8G00614
Arecaceae	Cocos nucifera	3	COCNU_02G003450, COCNU_03G012650, COCNU_06G003110
Arecaceae	Phoenix dactylifera	3	gene-LOC103710040, gene-LOC103710861, gene-LOC103713297
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.321.V1.1, AsparagusV1_05.2703.V1.1
Asteraceae	Flaveria trinervia	3	Ftri11G28852, Ftri15G25238, Ftri3G07972
Brassicaceae	Arabidopsis thaliana	3	AT2G46260.1, AT3G61600.1, AT4G01160.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10001385m.g.v1.0, Thhalv10005840m.g.v1.0 ... Thhalv10028626m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp4g28310.v2.2, Sp5g01810.v2.2, Sp6g00950.v2.2
Brassicaceae	Brassica nigra	7	BniB06g053090.2N, BniB08g030050.2N, BniB08g041400.2N ... BniB08g041420.2N, BniB08g041440.2N, BniB08g075730.2N, BniS06172g080.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1216, Ceq02G1217, Ceq03G0236
Casuarinaceae	Casuarina glauca	3	Cgl02G1256, Cgl02G1257, Cgl03G0282
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g12860, gene.Cymno02g12870
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g17470, gene.Thate09g15300
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-9521
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG04.766, evm.TU.LG10.1486
Plantaginaceae	Plantago ovata	2	Pov_00005308, Pov_00016644
Plumbaginaceae	Limonium bicolor	3	Lb1G03587, Lb1G03589, Lb1G03590
Poaceae	Echinochloa crus-galli	4	AH06.1786, AH07.1136, BH06.1663, BH07.1212
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0108370, gene-QOZ80_2BG0162030 ... gene-QOZ80_6AG0530390, gene-QOZ80_6BG0484190
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.5HG0529260.1, HORVU.MOREX.r3.5HG0529280.1 ... HORVU.MOREX.r3.5HG0529310.1, HORVU.MOREX.r3.7HG0710300.1, HORVU.MOREX.r3.7HG0710320.1
Poaceae	Lolium multiflorum	7	gene-QYE76_016707, gene-QYE76_022385, gene-QYE76_022396 ... gene-QYE76_034019, gene-QYE76_034506, gene-QYE76_060474, gene-QYE76_061020
Poaceae	Oryza coarctata	4	Oco03G007150, Oco04G007470, Oco11G010080, Oco12G010020
Poaceae	Oryza sativa	3	LOC_Os02g16000.1, LOC_Os06g31090.1, LOC_Os06g31100.1
Poaceae	Paspalum vaginatum	2	gene-BS78_04G111800, gene-BS78_10G143800
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0400107, Pt_Chr0400116
Poaceae	Sporobolus alterniflorus	6	Chr06G031860, Chr10G013030, Chr11G009230, Chr14G011390 ... Chr15G023090, Chr21G011540
Poaceae	Thinopyrum elongatum	4	Tel5E01G788300, Tel5E01G789900, Tel7E01G578100 ... Tel7E01G578200
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG054050, gene_TRIDC5AG052490 ... gene_TRIDC5BG076270, gene_TRIDC6BG050000, gene_TRIDC7AG048050, gene_TRIDC7BG039370
Poaceae	Triticum aestivum	7	TraesCS5B02G510800.2, TraesCS7A02G343900.3 ... TraesCS7A02G344000.1, TraesCS7B02G239100.1, TraesCS7B02G239200.6, TraesCS7D02G335600.1, TraesCS7D02G335700.3
Poaceae	Zea mays	3	Zm00001eb203840_P001, Zm00001eb237920_P001 ... Zm00001eb278060_P001
Poaceae	Zoysia japonica	1	nbis-gene-47879
Poaceae	Zoysia macrostachya	3	Zma_g12550, Zma_g30109, Zma_g32299
Portulacaceae	Portulaca oleracea	6	evm.TU.LG04.2210, evm.TU.LG06.96, evm.TU.LG10.434 ... evm.TU.LG17.430, evm.TU.LG19.1240, evm.TU.LG24.1250
Posidoniaceae	Posidonia oceanica	2	gene.Posoc08g14130, gene.Posoc09g08400
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_14_RagTag.137, evm.TU.Scaffold_5_RagTag.583 ... evm.TU.Scaffold_9_RagTag.567
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-10769, nbisL1-mrna-18271, nbisL1-mrna-21685
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-20591, nbisL1-mrna-2878, nbisL1-mrna-6097
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-10210, nbisL1-mrna-7369, nbisL1-mrna-8594
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000003l.230, evm.TU.utg000006l.442 ... evm.TU.utg000007l.311
Rhizophoraceae	Kandelia obovata	3	Maker00013939, Maker00017552, Maker00018476
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-10258, nbisL1-mrna-15992, nbisL1-mrna-1727
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-10957, nbisL1-mrna-19586, nbisL1-mrna-7231
Salicaceae	Populus euphratica	3	populus_peu03639, populus_peu27609, populus_peu31601
Solanaceae	Lycium barbarum	5	gene-LOC132603821, gene-LOC132632522, gene-LOC132634828 ... gene-LOC132634829, gene-LOC132645493
Solanaceae	Solanum chilense	4	SOLCI001514600, SOLCI002642900, SOLCI003519000 ... SOLCI005351500
Solanaceae	Solanum pennellii	4	gene-LOC107002594, gene-LOC107005428, gene-LOC107027487 ... gene-LOC107028222
Tamaricaceae	Reaumuria soongarica	3	STRG.23374_chr05_-, STRG.28952_chr11_-, STRG.9727_chr06_-
Tamaricaceae	Tamarix chinensis	4	TC01G3159, TC03G2165, TC06G0172, TC09G2290
Zosteraceae	Zostera marina	4	Zosma01g08660.v3.1, Zosma05g04960.v3.1, Zosma06g24200.v3.1 ... Zosma06g24290.v3.1