Basic Information
Locus ID:
nbis-gene-47802
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
CDKC
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00106.1 | 935922 | 942301 | + | nbis-gene-47802 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 12,812.75 Da | 73.62 | 103.62 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 115 | 1.96E-5 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 116 | 1.9E-5 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10270.1 | cyclin-dependent kinase C;1. Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. | 0 |
| RefSeq | XP_025820619.1 | cyclin-dependent kinase C-3 [Panicum hallii] | 0 |
| Q6ZAG3 | Cyclin-dependent kinase C-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKC-1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A5J9T2R4 | LRRNT_2 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48819 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703891 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr29G004630 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-47802 |