Basic Information
Locus ID:
nbis-gene-47607
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00106.1 | 89549 | 91194 | - | nbis-gene-47607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 46,113.41 Da | 36.68 | 85.43 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 4 | 41 | 1.1E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 43 | 2.88E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 47 | 1.5E-7 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 5.4E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 97 | 255 | 3.4E-18 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 51 | 11.140122 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974816.1 | F-box protein At3g07870 [Setaria italica] | 0 |
| TrEMBL | A0A5J9T248 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48513 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology