Basic Information
Locus ID:
nbis-gene-47544
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00105.1 | 720993 | 722871 | + | nbis-gene-47544 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 14,831.32 Da | 51.67 | 63.56 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00433 | Protein kinase C terminal domain | 9 | 53 | 2.5E-6 | IPR017892 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1 | 63 | 10.916502 | IPR000961 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 103 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.3 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_004963132.1 | serine/threonine-protein kinase tricorner [Setaria italica] | 0 |
| TrEMBL | A0A1D6KG12 | AGC (cAMP-dependent cGMP-dependent and protein kinase C) kinase family protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d031040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000014588 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.629.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G19378 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00009113 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-47544 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14891 |