Basic Information
Locus ID:
nbis-gene-47232
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00103.1 | 783369 | 789779 | + | nbis-gene-47232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.22 | 36,116.95 Da | 56.23 | 54.29 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 90 | 145 | 7.9E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 266 | 303 | 1.1E-9 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 251 | 306 | 6.93E-18 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 87 | 148 | 3.66E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 244 | 307 | 1.3E-17 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 75 | 149 | 1.2E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 259 | 305 | 7.1E-19 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 89 | 147 | 5.9E-34 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 84 | 148 | 24.695982 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 254 | 306 | 23.238354 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 189 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.2 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_002467677.2 | probable WRKY transcription factor 4 [Sorghum bicolor] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | C5WVP7 | WRKY transcription factor 3 OS=Sorghum bicolor OX=4558 GN=SORBI_3001G332500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology