Basic Information
Locus ID:
nbis-gene-46883
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00101.1 | 429070 | 440180 | + | nbis-gene-46883 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 101,494.72 Da | 40.86 | 92.44 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 163 | 223 | 1.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 81 | 3.3E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 631 | 775 | 5.8E-32 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 306 | 342 | 3.0E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 612 | 881 | 4.1E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 401 | 3.23E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 802 | 873 | 1.9E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 419 | 8.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 588 | 701 | 5.7E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 702 | 801 | 1.0E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 301 | 3.1E-59 | IPR032675 |
| SMART | SM00220 | serkin_6 | 626 | 853 | 3.5E-16 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 138 | 162 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 329 | 353 | 0.34 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 233 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 230.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 626 | 922 | 25.997385 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 746 | 758 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 632 | 654 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 861 | 900 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025824162.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A811QZ92 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS44914 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology