Basic Information
Locus ID:
nbis-gene-4672
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00003.1 | 6184458 | 6187883 | - | nbis-gene-4672 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 59,692.51 Da | 46.50 | 82.19 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 217 | 488 | 6.82846E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 214 | 487 | 9.6E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 188 | 490 | 5.53E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 287 | 498 | 2.8E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 286 | 4.3E-33 | - |
| SMART | SM00220 | serkin_6 | 211 | 494 | 2.5E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 211 | 493 | 34.802868 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 338 | 350 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 217 | 239 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 522 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_025795687.1 | probable serine/threonine-protein kinase At1g01540 [Panicum hallii] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3L6S898 | Putative serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM02G39120 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology