HalophFGD

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Basic Information
Locus ID: nbis-gene-46514
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description: Protein of unknown function, DUF573
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00098.1 796079 796702 - nbis-gene-46514
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.01 23,821.31 Da 51.26 81.01 -0.77
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF04504 Protein of unknown function, DUF573 28 115 5.5E-13 IPR007592
MobiDBLite mobidb-lite consensus disorder prediction 1 27 - -
Gene Ontology
Biological Process:
GO:0006355 (regulation of DNA-templated transcription)
KEGG Pathway
KO Term:
K18045 (tyrosine-protein phosphatase SIW14 [EC:3.1.3.48])
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039791550.1 probable transcription factor At1g11510 [Panicum virgatum] 0
TrEMBL A0A835F705 Myb_DNA-bind_3 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_017236 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Brassicaceae Brassica nigra 1 BniB06g054100.2N
Poaceae Echinochloa crus-galli 9 AH07.3635, AH09.45, BH02.2324, BH07.3445, BH09.87, CH02.2490 ...
CH06.1643, CH07.3515, CH09.102
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_4AG0327540, gene-QOZ80_4AG0327810 ...
gene-QOZ80_4AG0327920, gene-QOZ80_4AG0328150, gene-QOZ80_4BG0359970, gene-QOZ80_4BG0360250, gene-QOZ80_9AG0675040, gene-QOZ80_9AG0679020, gene-QOZ80_9BG0698830
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.3HG0225780.1.CDS1 ...
HORVU.MOREX.r3.5HG0485830.1.CDS1, HORVU.MOREX.r3.6HG0561820.1.CDS1, HORVU.MOREX.r3.6HG0561940.1.CDS1, HORVU.MOREX.r3.6HG0563210.2, HORVU.MOREX.r3.6HG0618690.1.CDS1, HORVU.MOREX.r3.7HG0668950.1.CDS1
Poaceae Lolium multiflorum 10 gene-QYE76_016834, gene-QYE76_025728, gene-QYE76_043286 ...
gene-QYE76_048176, gene-QYE76_048894, gene-QYE76_049010, gene-QYE76_051877, gene-QYE76_051900, gene-QYE76_052100, gene-QYE76_052308
Poaceae Oryza coarctata 7 Oco03G022930, Oco04G023540, Oco12G009120, Oco17G000030 ...
Oco17G000090, Oco17G000550, Oco18G000160
Poaceae Oryza sativa 5 LOC_Os01g32890.1, LOC_Os02g53150.1, LOC_Os06g30250.1 ...
LOC_Os09g01140.1, LOC_Os09g03990.1
Poaceae Paspalum vaginatum 5 gene-BS78_04G029000, gene-BS78_04G290500 ...
gene-BS78_06G000700, gene-BS78_06G000800, gene-BS78_10G273800
Poaceae Puccinellia tenuiflora 8 Pt_Chr0102370, Pt_Chr0102404, Pt_Chr0102922, Pt_Chr0203108 ...
Pt_Chr0603323, Pt_Chr0603456, Pt_Chr0603490, Pt_Chr0705147
Poaceae Sporobolus alterniflorus 10 Chr01G023370, Chr03G009260, Chr09G006860, Chr09G007530 ...
Chr09G018620, Chr10G002720, Chr11G016080, Chr13G003020, Chr13G016490, Chr19G010690
Poaceae Thinopyrum elongatum 3 Tel5E01G039900, Tel6E01G197900, Tel7E01G366400
Poaceae Triticum dicoccoides 5 gene_TRIDC3BG016780, gene_TRIDC6AG048840 ...
gene_TRIDC6BG057130, gene_TRIDC7AG025300, gene_TRIDC7BG015530
Poaceae Triticum aestivum 13 TraesCS1B02G087500.1.cds1, TraesCS3A02G036700.1.cds1 ...
TraesCS3B02G047200.1.cds1, TraesCS3B02G119900.1.cds1, TraesCS3D02G043400.1.cds1, TraesCS5D02G022400.1, TraesCS5D02G022900.1, TraesCS6A02G326000.1.cds1, TraesCS6B02G356300.1.cds1, TraesCS6D02G305700.1, TraesCS7A02G199000.1.cds1, TraesCS7B02G105700.1.cds1, TraesCS7D02G201700.1.cds1
Poaceae Zea mays 12 Zm00001eb064430_P001, Zm00001eb149210_P001 ...
Zm00001eb190050_P001, Zm00001eb213510_P001, Zm00001eb213600_P002, Zm00001eb256290_P001, Zm00001eb264080_P002, Zm00001eb264130_P002, Zm00001eb264150_P001, Zm00001eb367480_P001, Zm00001eb390570_P001, Zm00001eb418630_P001
Poaceae Zoysia japonica 6 nbis-gene-19141, nbis-gene-28818, nbis-gene-40062 ...
nbis-gene-41896, nbis-gene-46489, nbis-gene-46514
Poaceae Zoysia macrostachya 5 Zma_g17240, Zma_g26654, Zma_g26665, Zma_g29668, Zma_g8001
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.